Show all posts by user
Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely,
AFNI HQ
History of AFNI updates
Page 1 of 1 Pages: 1
Results 1 - 9 of 9
POSTDOCTORAL FELLOWSHIP
SECTIONS ON INTEGRATIVE NEUROIMAGING and BEHAVIORAL ENDOCRINOLOGY
NATIONAL INSTITUTE OF MENTAL HEALTH, NIH INTRAMURAL RESEARCH PROGRAM, DHHS, BETHESDA, MD
Drs. Karen Berman and Peter Schmidt, at the National Institute of Mental Health Intramural Research Program (NIMH IRP), at the National Institutes of Health (NIH), invite interested individuals to apply for a three- t
by
jasmins
-
AFNI Message Board
POSTDOCTORAL FELLOWSHIP
SECTION ON INTEGRATIVE NEUROIMAGING
CLINICAL & TRANSLATIONAL NEUROSCIENCE BRANCH
NATIONAL INSTITUTE OF MENTAL HEALTH, NIH
INTRAMURAL RESEARCH PROGRAM, DHHS, BETHESDA, MD
Dr. Karen Berman, Chief of the Clinical & Translational Neuroscience Branch of the National Institute of Mental Health Intramural Research Program (NIMH IRP), at the National Institutes of Hea
by
jasmins
-
AFNI Message Board
Hi,
I run afni_proc and in my results was the following directory called RSFC that includes afll files.
Just want to confirm that afni_proc scripts now automatically run alff processing, correct?
Thanks! Jasmin
by
jasmins
-
AFNI Message Board
Hi Rick, thank you!
The first two commands work.
afni -available_npb
afni -npb 1 T1_dartel_avg_240sagvols_1.5mm_MNI.nii
However, the third one does not. This is the error message.
3dGroupInCorr -npb 1 -setA globalETAC.mthresh.ttest_FALFF.HVs_F74s.default.ETAC.A.5perc.niml
This is the error message:
Fatal Signal 6 (SIGABRT) received
3dGroupInCorr
by
jasmins
-
AFNI Message Board
Hi, I am trying to utilize 3dGroupCorr. I am not sure of my commands are correct since the option to perform the operation is not coming up (see commands below).
Any guidance would be greatly appreciated. Thanks!
_____
shiva:/x/wmg15/jasmins/STRUCTSpt/GrpResults> afni -niml template_T1_dartel_strip_240sagvols_1.5mm_MNI.nii
Precompiled binary linux_openmp_64: Aug 19 2020 (Version AFN
by
jasmins
-
AFNI Message Board
POSTDOCTORAL FELLOWSHIP
SECTION ON INTEGRATIVE NEUROIMAGING
CLINICAL & TRANSLATIONAL NEUROSCIENCE BRANCH
NATIONAL INSTITUTE OF MENTAL HEALTH, NIH
INTRAMURAL RESEARCH PROGRAM, DHHS, BETHESDA, MD
Dr. Karen Berman, Chief of the Clinical & Translational Neuroscience Branch of the National Institute of Mental Health Intramural Research Program (NIMH IRP), at the National Institutes of
by
jasmins
-
AFNI Message Board
POSTDOCTORAL FELLOWSHIP IN MULTIMODAL NEUROIMAGING
SECTION ON INTEGRATIVE NEUROIMAGING
CLINICAL & TRANSLATIONAL NEUROSCIENCE BRANCH
NATIONAL INSTITUTE OF MENTAL HEALTH, NIH
INTRAMURAL RESEARCH PROGRAM, DHHS, BETHESDA, MD
The Section on Integrative Neuroimaging in the Clinical & Translational Neuroscience Branch of the National Institute of Mental Health Intramural Research Program
by
jasmins
-
AFNI Message Board
Hi there!
I've been trying to use align_epi_anat.py (version 1.44) to coregister two nifti volumes, though the script seems to run into the following issues.
If the epi file is not in AFNI format (and attempting to skull strip):
++ 3dbucket: AFNI version=AFNI_2011_12_21_1014 (Mar 12 2014) [64-bit]
** ERROR: Could not 3dTstat epi
#++ removing skull or area outside brain
Traceback (m
by
jasmins
-
AFNI Message Board
Hi,
Does AFNI have the option of performing ICA's on restings data. I am running some seed based analyses, but would also like to look at the data from a different angle.
Thanks, Jasmin
by
jasmins
-
AFNI Message Board