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Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely,
AFNI HQ
History of AFNI updates
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Hi Daniel,
Thanks for your reply. I found out what the problem was. I was looking into clusters using option while thresholding t-values which are the values of voxels. I found that the spot I was dealing with consists of two voxels: one is larger than the threshold value I set, and the other is smaller than the threshold. I realized that the threshold I set lies between intensities of two vo
by
lst715
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AFNI Message Board
Hi Afniers,
I have been investigating and dealing with t-values of FA on AFNI. I am trying to thresholding t-statistics image in order to zero all voxels that are smaller than a particular t-value (in my case, t = 3.372 corresponding to p-value, 0.005). However, I have experienced a weird thing when I adjust vertical bar to threshold OverLay image. Even though I do not reach 3.372 and just rea
by
lst715
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AFNI Message Board
Thank you very much. I put them in the afni bin folder as you explained. Hope this works well :D
I appreciate it!
by
lst715
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AFNI Message Board
LOL.
After reading the output of what you suggested, I found out that I did not set path for AFNI_TTATLAS_DATASET! I set path correctly and now the plugin works well! thank you! I appreciate it.
by
lst715
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AFNI Message Board
Thank you for your advice. I posted both of what you suggested.
1. The output from running afni is as follows:
stlee@cerberus ~/Desktop/stlee/AFNI/Patients_all_in_one/115 $ afni
Thanks go to RM Birn for "quick" questions
Initializing: X11.. Widgets...... Input files:ONLY ATLASES** AFNI converts NIFTI_datatype=4 (INT16) in file /home/stlee/Desktop/stlee/AFNI/Patients_all_in_o
by
lst715
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AFNI Message Board
Hello. I am a newbie user of AFNI.
Looks like all the plugins work well but when I click "draw dataset plugin", AFNI is just forced to be termiated. Is there anyone who encountered with this issue and know how to fix this?
Your help in this would be greatly appreciated in advance!
by
lst715
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AFNI Message Board