Doxygen Source Code Documentation

AFNI_SliceDispManip.m File Reference


Functions
	for (i=1:1:3)
switch	DispManip (i).plane
i	zflip ()
switch different planes	if (iA==2) = find (DispManip(i).orient == 'S') find (DispManip(i).orient == 'A')
i	orpermute ()
end	if (jA==2)
i	udflip ()
end	if (jL==2)
i	lrflip ()
	if (DispManip(i).orpermute)
Variables
	function [DispManip]
	Sa
	Co
respectively	SliceDim
respectively respectively	Disporient
respectively respectively Bethesda Maryland Define the function name for easy referencing	FuncName = 'AFNI_SliceDispManip'
Debug Flag	DBG = 1
switch	i
switch	case = find(B_Info.Orientation == 'I')
switch different planes must permute	orders
end must flip up to	down
end end apply the manipulations to the slice orientation	matrix
end end	err = 0
	return

Function Documentation

switch DispManip

(

)

for ( i = 1:1:3 )

end if

(

DispManip(i).

lrflip

)

end if ( jL = = 2 )

end if ( jA = = 2 )

end if ( iA = = 2 ) = find (DispManip(i).orient == 'S') find (DispManip(i).orient == 'A')

i lrflip ( ) [virtual]

i orpermute ( ) [virtual]

i udflip ( ) [virtual]

i zflip ( ) [virtual]

Variable Documentation

end case = find(B_Info.Orientation == 'I')

Definition at line 106 of file AFNI_SliceDispManip.m.

Definition at line 1 of file AFNI_SliceDispManip.m.

Debug Flag DBG = 1

Definition at line 53 of file AFNI_SliceDispManip.m.

respectively respectively Disporient

Definition at line 1 of file AFNI_SliceDispManip.m.

end must flip up to down

Definition at line 110 of file AFNI_SliceDispManip.m.

end end err = 0

Definition at line 126 of file AFNI_SliceDispManip.m.

respectively respectively Bethesda Maryland Define the function name for easy referencing FuncName = 'AFNI_SliceDispManip'

Definition at line 50 of file AFNI_SliceDispManip.m.

function[DispManip]

Initial value:

 AFNI_SliceDispManip (B_Info)
%
%   [DispManip] = AFNI_SliceDispManip (B_Info)
%
%Purpose:
%   
%   Determine the manipulations necessary to apply to a 
%  slice for proper display a la AFNI
%   
%Input Parameters:
%   B_Info the output of BrickInfo function
%   
%   
%Output Parameters:
%   err : 0 No Problem
%       : 1 Mucho Problems
%   DispManip is a 3x1 structure with the following structures
%      .plane : 2 character string specifying the plane ('Ax', 'Sa', Co')
%            this is a bit redundant since the three elements of 
%             DispManip always refer to 'Ax'

Definition at line 1 of file AFNI_SliceDispManip.m.

switch i

Definition at line 89 of file AFNI_SliceDispManip.m.

end end apply the manipulations to the slice orientation matrix

Definition at line 116 of file AFNI_SliceDispManip.m.

Referenced by AFNI_finalsave_layout_CB(), calculate_results(), do_xrestore_stuff(), main(), mri_imcount_siemens(), mri_read_siemens(), vpGetMatrix(), vpMultMatrix(), and vpSetMatrix().

end must permute orders

Definition at line 108 of file AFNI_SliceDispManip.m.

return

Definition at line 127 of file AFNI_SliceDispManip.m.

Definition at line 1 of file AFNI_SliceDispManip.m.

respectively SliceDim

Definition at line 1 of file AFNI_SliceDispManip.m.

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