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October 15, 2012 12:58PM
Hello!

I am currently using a script with 3dDeconvolve, which first defines the categories via -stim_times with onset timing files, and then subsequently defining the contrasts I want using -gltsym. However, I have discovered that there is an upper limit as to how many contrasts one can define; thus, I had to break my contrasts down and run 2 scripts in 2 separate parts.

I was wondering if anyone knew a way to do this in 2 distinct steps: first, read in the onset files using -stim_times, and then defining the contrasts using -gltsym as a stand-alone script, having already read in the onset timing files. This way, *all* the contrasts could be run in one script without having to split them up.

Thanks a bunch!

Cynthia
Subject Author Posted

3dDeconvolve Contrasts without stim times

cynthiaspeng October 15, 2012 12:58PM

Re: 3dDeconvolve Contrasts without stim times

Peter Molfese October 15, 2012 01:13PM

Re: 3dDeconvolve Contrasts without stim times

rick reynolds October 15, 2012 01:40PM