AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

Previous Message Next Message
Message List New Topic Print View
|
Daniel Glen
November 06, 2012 03:38PM
That's not exactly what I had in mind. If you create two AFNI BRIK files from the same Philips datasets, you can do a simple diff on the .BRIK files to see if the binary data differ. You can also use 3dcalc to calculate the difference between the two datasets and look at that in the AFNI GUI.

If the two are determined to be different and if you know the slice timing (alt+z), then you can use 3dTshift to correct and see if the PAR/REC-source dataset then matches the NIFTI converted dataset. Philips support can also answer specifics like this if you are using their software to convert the data.
Reply Quote
RSS
Subject Author Posted

Slice timing correction issue

gauravm November 06, 2012 01:19PM

Re: Slice timing correction issue

Daniel Glen November 06, 2012 02:08PM

Re: Slice timing correction issue

gauravm November 06, 2012 03:25PM

Re: Slice timing correction issue

Daniel Glen November 06, 2012 03:38PM

Re: Slice timing correction issue

gauravm November 06, 2012 05:13PM

Re: Slice timing correction issue

Daniel Glen November 06, 2012 09:48PM

Re: Slice timing correction issue

Daniel Glen November 08, 2012 04:28PM

Re: Slice timing correction issue

gauravm November 18, 2012 04:04PM

Re: Slice timing correction issue

Peter Molfese November 18, 2012 04:33PM

Re: Slice timing correction issue

gauravm November 19, 2012 09:42AM

Re: Slice timing correction issue

rick reynolds November 19, 2012 09:55AM