AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 10, 2013 07:40PM
Hello, I am trying to write an ebuild (Gentoo package atom) for AFNI. This would enable Gentoo users to compile the newest AFNI on their systems via a single command. If there is any sort of repository with versioned AFNI releases, the Gentoo package manager would even take care of keeping AFNI up-to-date. In any case, I am having some issues which I believe root in part in missing deps and in part in the makefiles provided with afni.

Here is my current ebuild [github.com] (ebuilds are simply lists of compile specifications), and this is my build/compile output.

I believe the compilation fails because of an issue with tracktools: /usr/lib/gcc/x86_64-pc-linux-gnu/4.7.3/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -ltracktools . An other poster here, indicated that he solved that issue by installing tcsh ( [afni.nimh.nih.gov] ) - but I have tcsh installed and I still get this issue.

I would be very thankful if anyone could give me a hand with this.
Subject Author Posted

Cannot compile AFNI on Gentoo machine

TheChymera September 10, 2013 07:40PM

Re: Cannot compile AFNI on Gentoo machine

rick reynolds September 10, 2013 09:23PM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 11, 2013 03:35PM

Re: Cannot compile AFNI on Gentoo machine

rick reynolds September 11, 2013 03:59PM

Re: Cannot compile AFNI on Gentoo machine

Isaac Schwabacher September 11, 2013 03:59PM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 11, 2013 10:07PM

Re: Cannot compile AFNI on Gentoo machine

rick reynolds September 12, 2013 08:58PM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 13, 2013 01:15AM

Re: Cannot compile AFNI on Gentoo machine

rick reynolds September 13, 2013 08:10AM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 15, 2013 12:44AM

Re: Cannot compile AFNI on Gentoo machine

rick reynolds September 15, 2013 11:05AM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 15, 2013 07:14PM

Re: Cannot compile AFNI on Gentoo machine

rick reynolds September 16, 2013 09:09AM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 17, 2013 12:31AM

Re: Cannot compile AFNI on Gentoo machine

rick reynolds September 17, 2013 09:10AM

Re: Cannot compile AFNI on Gentoo machine

The Chymera September 18, 2013 08:48AM

Re: Cannot compile AFNI on Gentoo machine

rick reynolds September 18, 2013 09:36AM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 18, 2013 09:04PM

Re: Cannot compile AFNI on Gentoo machine

rick reynolds September 19, 2013 08:32AM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 19, 2013 08:05PM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 19, 2013 08:26PM

Re: Cannot compile AFNI on Gentoo machine

nick September 19, 2013 08:59PM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 21, 2013 08:50AM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 21, 2013 08:56AM

Re: Cannot compile AFNI on Gentoo machine

yarikoptic September 18, 2013 01:37PM

Re: Cannot compile AFNI on Gentoo machine

TheChymera September 18, 2013 08:52PM

Re: Cannot compile AFNI on Gentoo machine

yarikoptic September 19, 2013 10:45AM