AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
February 17, 2014 10:49AM
Hi Kara,

kblacker Wrote:
-------------------------------------------------------
> Thanks for the explanation of the node index
> values; that was very helpful.

You're welcome.

> However, when I set
> the pad_to_node value as you suggested I am still
> getting the same error message. One thing that
> occurred to me is that my input data for
> ConvertDsets was the result of my GLM for that
> individual subject. I tried running it on my
> pre-processed data, before running the GLM as well
> and got the same error. Below is the output of
> SurfDsetInfo (for my GLM output file) as you
> asked, the script I tried to run using
> ConvertDsets and the error message.

That all looks quite normal to me. In particular the different sub-'bricks' have proper labels attached to them, as one would expect from 3dDeconvolve's output; yet something goes wrong setting COLMS_LABS, which (in volumetric world) contains these labels.

As Ziad said it may be a bug, I would suggest to wait until he has had a chance to look into this.

best,
Nick
Subject Author Posted

when and how to use standard meshes in SUMA

kblacker February 13, 2014 10:13AM

Re: when and how to use standard meshes in SUMA

nick February 13, 2014 10:54AM

Re: ConvertDsets error

kblacker February 15, 2014 11:23AM

Re: ConvertDsets error

nick February 15, 2014 01:03PM

Re: ConvertDsets error

kblacker February 17, 2014 09:37AM

Re: ConvertDsets error

nick February 17, 2014 10:49AM

Re: when and how to use standard meshes in SUMA

ziad February 15, 2014 05:58PM

Re: when and how to use standard meshes in SUMA

kblacker February 17, 2014 09:41AM

Re: when and how to use standard meshes in SUMA

kblacker February 18, 2014 01:30PM

Re: when and how to use standard meshes in SUMA

ziad February 19, 2014 08:38PM

Re: when and how to use standard meshes in SUMA

kblacker February 20, 2014 10:50AM

Re: when and how to use standard meshes in SUMA

rick reynolds February 20, 2014 11:05AM

Re: when and how to use standard meshes in SUMA

ziad February 20, 2014 11:28AM