yfh2013 Wrote:
-------------------------------------------------------
> I check the All_lh_ld141.spec in the demo. It is
> as followed:
> #define the group
> Group = All_lh_ld141
>
> #define various States
> StateDef = mappedSphere.reg
> StateDef = mappedSphrNoReg
> [...]
> NewSurface
> SurfaceFormat = ASCII
> SurfaceType = GIFTI
> SurfaceName = FI_lh_ld141_mappedSmWm.gii
> MappingRef = SAME
> SurfaceState = FImappedSmWm
> EmbedDimension = 3
>
> NewSurface
> SurfaceFormat = ASCII
> SurfaceType = GIFTI
> FreeSurferSurface = FJ_lh_ld141_mappedSmWm.gii
> MappingRef = FI_lh_ld141_mappedSmWm.gii
> SurfaceState = FJmappedSmWm
> EmbedDimension = 3
> [...]
> There is no "LocalCurvatureParent", and
> "LocalDomainParent" in it. I want to know if I
> just need to modify the value of
> "FreeSurferSurface""MappingRef"SurfaceState" in
> it.

I guess newer versions put some different fields in there than what my older spec file has, but that's fine.

The crucial point here is to change the filenames of the surface files so that they match the files you have. With GIFTI output surfaces have the extension ".gii"; otherwise they would be ".asc". In your spec files these are the fields FreeSurferSurface and MappingRef.

So I would suggest to change these to match your filenames, then give it a try.