AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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April 15, 2014 11:36AM
Dear Ziad,
I can not open the subject.niml.dset. So I am not sure which value should I use in it. As I want to get mean value at each node from a group of subjects. In the subject.1D.dat, I know the value is in the 6th column. But for the subject.niml.dset, I can not figure out what is in it. So I have no idea about how to use 3dcalc and 3dMean for it.
I want to make sure if it is right as followed:
3dcalc -a Subject1.niml.dset#6 \
-b Subject2.niml.dset#6 \
.
.
.
-expr mean(a,b,...)
-prefix mean_suject.niml.dset


or
3dcalc -a Subject1.niml.dset[6] \
> -b Subject2.niml.dset[6] \
> .
> .
> .
> -expr mean(a,b,...)
> -prefix mean_suject.niml.dset
If there is something wrong in the code, please modify it for me. As after that I need to use it in SUMA. So that I can see the value in color. Is it right to do it in this way?Thanks!



Edited 2 time(s). Last edit at 04/15/2014 11:51AM by Linda.
Subject Author Posted

Problem about using ScaletoMap in SUMA?

Linda April 11, 2014 09:41AM

Re: Problem about using ScaletoMap in SUMA?

ziad April 14, 2014 01:50PM

Re: Problem about using ScaletoMap in SUMA?

yfh2013 April 14, 2014 08:16PM

Re: Problem about using ScaletoMap in SUMA?

Linda April 14, 2014 08:21PM

Re: Problem about using ScaletoMap in SUMA?

Linda April 14, 2014 10:37PM

Re: Problem about using ScaletoMap in SUMA?

ziad April 15, 2014 11:03AM

Re: Problem about using ScaletoMap in SUMA?

Linda April 15, 2014 11:36AM

Re: Problem about using ScaletoMap in SUMA?

ziad April 15, 2014 12:05PM

Re: Problem about using ScaletoMap in SUMA?

Linda April 15, 2014 12:54PM

Re: Problem about using ScaletoMap in SUMA?

nick April 16, 2014 07:58AM

Re: Problem about using ScaletoMap in SUMA?

nick April 16, 2014 07:53AM