AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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June 18, 2014 04:54PM
Hi AFNI folks,

I'm running @SUMA_Make_Spec_FS for the first time in a while. Here's the command I'm using:

@SUMA_Make_Spec_FS -sid MusicCog_AER -debug 2 -neuro -use_mgz

After a minute or so, it looks like a to3d command is executed, at which time to3d is launched and then
the script just hangs. Doesn't seem to have crashed, but it looks like to3d is still working. Here are the last
few lines of output to the screen:

to3d -prefix MusicCog_AER_SurfVol -xSLAB 128.000000L-127.000000R -ySLAB 128.000000S-127.000000I -zSLAB 128.000000P-127.000000A 3Db:0:0:256:256:1:COR-???
++ to3d: AFNI version=AFNI_2011_12_21_1014 (Nov 15 2012) [64-bit]
++ Authored by: RW Cox

I suspect that maybe to3d has launched interactive mode, but because I'm running this over a long-distance network, the window didn't pop-up locally. But, maybe I'm wrong.

Either way, any thoughts on how to get past this?

Thanks,
Adam
Subject Author Posted

@SUMA_Make_Spec_FS hanging

Adam Greenberg June 18, 2014 04:54PM

Re: @SUMA_Make_Spec_FS hanging

ziad June 18, 2014 05:03PM

Re: @SUMA_Make_Spec_FS hanging

rick reynolds June 18, 2014 05:17PM

Re: @SUMA_Make_Spec_FS hanging

Adam Greenberg June 18, 2014 05:42PM

Re: @SUMA_Make_Spec_FS hanging

Adam Greenberg June 19, 2014 06:40PM

Re: @SUMA_Make_Spec_FS hanging

ziad June 20, 2014 12:53PM