Hi, Experts,
I attempted to run a meica.py as below, however, it gave me an error alarm "FATAL ERROR: can't open dataset R1+orig[0]". I could not figure out the problem. I see that the problem happened because of my "--align_base" setting. My understanding was that the reference volume should be closest to the anatomical scanning, so I used [0]. Even I remove the [0], the script still reported the same alarm.
meica.py -d "run1.e0[1,2,3].nii" -a ../mprage/mprage_scan_1+orig.BRIK -e 15,28,42 -b 10 --tlrc=TT_N27+tlrc --align_base=R1+orig'[0]' --tpattern=alt+z --prefix=Tep_run1
Thanks so much for any advice.
Juan
