History of AFNI updates  

|
January 21, 2015 12:43PM
Dear AFNI gurus,

I'm running preprocessing for resting state functional connectivitiy using the afni_proc.py example 9a. The problem is losing quite a few subjects because of bandpass filtering and censoring as a result of motion. I changed censor options to -regress_censor_motion 0.3 -regress_censor_outliers 0.5, but still they fail as there not enough degrees of freedom.

I would like to know if there are any ways to rescue some of these cases. I'm attaching the script and a log file.

Thanks
Hema
Subject Author Posted

Bandpass filtering and censoring

hemasam January 21, 2015 12:43PM

Re: Bandpass filtering and censoring

rick reynolds January 21, 2015 01:32PM

Re: Bandpass filtering and censoring

hemasam January 23, 2015 01:45PM

Re: Bandpass filtering and censoring

rick reynolds January 26, 2015 02:29PM

Re: Bandpass filtering and censoring

hemasam January 29, 2015 01:34PM

Re: Bandpass filtering and censoring

rick reynolds February 03, 2015 09:52AM

Re: Bandpass filtering and censoring

hemasam February 03, 2015 10:53AM

Re: Bandpass filtering and censoring

rick reynolds February 03, 2015 11:49AM

Re: Bandpass filtering and censoring

hemasam February 03, 2015 01:05PM

Re: Bandpass filtering and censoring

hemasam February 04, 2015 03:42PM

Re: Bandpass filtering and censoring

rick reynolds February 06, 2015 03:10PM

Re: Bandpass filtering and censoring

hemasam February 12, 2015 11:19AM