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Peter Molfese
January 28, 2015 03:32PM
1. Yes, use the smoothed data for 3dFWHMx.
2. If you already have a template, then just mask it with 3dAutomask (or like SPM tool) and make sure that the mask covers the areas that you are interested in looking at statistically.
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Input files to 3dFWHMx and 3dClustSim command for VBM data (from SPM)

andrea.gold@nih.gov January 25, 2015 11:38AM

Re: Input files to 3dFWHMx and 3dClustSim command for VBM data (from SPM)

Peter Molfese January 25, 2015 12:43PM

Re: Input files to 3dFWHMx and 3dClustSim command for VBM data (from SPM)

andrea.gold@nih.gov January 28, 2015 02:45PM

Re: Input files to 3dFWHMx and 3dClustSim command for VBM data (from SPM)

Peter Molfese January 28, 2015 03:32PM