Dear all,
When trying to preprocess my functional mri data with the following command (preproc-sess -s sess04 -fsd bold -stc up -surface fsaverage lhrl -mni305 -fwhm 5 -per-run), I get the follwing error message:
Fatal Signal 11 (SIGSEGV) received
mri_add_name
mri_to_float
mri_3dalign_setup
3dvolreg main
Bottom of Debug Stack
** AFNI version = AFNI_2011_12_21_1014 Compile date = Sep 9 2014
** [[Precompiled binary =Debian-x86_64-1-gnu: Sep 9 2014]]
** Program Abort **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
ERROR: 3dvolreg.afni
Invalid null command.
I am very much a newbie at AFNI and programming in gereral. I got the command from here (https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastPreProc). It actually worked fine for this exact data set until yesterday when I randomely decided to update my AFNI version. I am running ubuntu v13.04 (64-bit) and would greatly appreciate your help.
Cheers,
Mareike
