History of AFNI updates  

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February 20, 2015 04:08PM avatar
Dear All,

good day, hope all's well.

Was wondering if you could let me know if the following pipeline would be acceptable or problematic for fMRI data:

EPI images > realigned images > First-level analysis in native subject space > spatial normalization of contrast images to ICBM template > spatial smoothing (8 mm FHWM) > second level analysis (ICBM space).

If I'm not mistaken, this is the pipeline that Joern recommends when using SUIT
[www.icn.ucl.ac.uk]

Would that be also acceptable using the standard ICBM template? Is it violating any gaussian assumptions for the analysis of data at the first level?

A great many thanks and apologies for the naivete of the question

georgios

Dr. Georgios P. Argyropoulos
Postdoctoral Researcher
[argyropoulos.blogspot.co.uk]
Subject Author Posted

pipeline feedback...?

Georgios February 20, 2015 04:08PM

Re: pipeline feedback...?

rick reynolds February 27, 2015 01:30PM

Re: pipeline feedback...?

Georgios February 28, 2015 02:12PM