Hi there,
I'm trying to run 3dNetCorr so that I can get a whole-brain map showing z-transformed correlations with a given ROI. The ROI file I have provided in "-in_rois" has two different ROIs in it. The script I'm running to do this is as follows. And, of course, I'm doing this at the single-subject level.
3dNetCorr \
-inset rest_raw_rdptkmas173ndb.nii.gz
-in_rois ROIdir/PCCand2.nii.gz
-fish_z
-ts_wb_Z
-nifti
-prefix 001-T1_PCCand2
However, I'm getting the following error:
** ERROR: Bad option '-ts_wb_Z'
Removing this option doesn't fix the problem (it gives me: ** ERROR: Bad option '-nifti'). Can you please advise about how to troubleshoot?
Many thanks,
Sarah
