AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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June 09, 2015 04:25PM
Hi Kristin,

In BLOCK(6.5,1) vs. BLOCK(3.5,1), the ,1 means that
each curve's peak gets scaled to 1. Now imagine 2
identical stimuli, except that one lasts 3.5 s, while
the other lasts 6.5 s, and picture the result at one
location in the brain.

One would except identical responses, except that
the 6.5 s BOLD response would be bigger (it would
convolve to a wider and higher signal). But if one
wanted to answer the question of which stimulus the
brain responded more to, the answer should be neither,
the responses were the same. The comparison is not
fair if one stimulus lasted much longer.

But using BLOCK(6) vs BLOCK(3.5) _does_ result in a
valid comparison, because the betas are essentially
scaled down by the convolution height. It is more
like the betas reflect the signal change as if the
events were instantaneous.

- rick
Subject Author Posted

correct handling of variable event durations in afni_proc.py

KristinBH June 02, 2015 10:36AM

Re: correct handling of variable event durations in afni_proc.py

rick reynolds June 03, 2015 10:40AM

Re: correct handling of variable event durations in afni_proc.py

KristinBH June 03, 2015 12:50PM

Re: correct handling of variable event durations in afni_proc.py

KristinBH June 07, 2015 04:22PM

Re: correct handling of variable event durations in afni_proc.py

rick reynolds June 07, 2015 09:03PM

Re: correct handling of variable event durations in afni_proc.py

rick reynolds June 09, 2015 04:25PM