I've tried running script #9 and #10 with afni_proc.py but I receive some errors.
** 3dAttribute exec failure for "TAXIS_NUMS /Modularity_TestAFNI1/SMART001bfMRI+orig.BRIK"
shell error:
*** Can't open dataset /Modularity_TestAFNI1/SMART001bfMRI+orig.BRIK
** failed to find the number of TRs from dset '/Modularity_TestAFNI1/SMART001bfMRI+orig.BRIK'
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** failed command (create_script):
afni_proc.py -subj_id SMART -dsets \
/Modularity_TestAFNI1/SMART001bfMRI+orig.BRIK -copy_anat \
SMART001bT1.nii -blocks despike tshift align tlrc volreg blur mask \
regress -tcat_remove_first_trs 3 -volreg_align_e2a -volreg_tlrc_warp \
-mask_segment_anat yes -mask_segment_erode yes -regress_censor_motion \
0.2 -regress_censor_outliers 0.1 -regress_bandpass 0.01 0.1 \
-regress_apply_mot_types demean deriv -regress_ROI WMe CSFe \
-regress_run_clustsim no -regress_est_blur_errts
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I'm not using #11 because I don't have any freesurfer data and don't have any masks made. I thought that's what this script did. Any help for this newbie would be appreciated.
-Noah
