Hello,
I am trying to use the -use_skull option with 3dSkullStrip but it can't find the qhull command even though the binary is present in the same directory.
This is the output:
$ ./3dSkullStrip -input ../../../Development/brain/ATLAS/N4_DN_t1.head.nii.gz -prefix USE_SKULL_t1.head.nii -use_skull
sh: qhull: command not found
-- Error SUMA_q_wrap (SUMA_GeomComp.c:14577):
1st fscanf fails
Error SUMA_LoadPrepInVol:
Failed in SUMA_qhull_wrap
Fatal Signal 11 (SIGSEGV) received
SUMA_SkullMask
3dSkullStrip
Bottom of Debug Stack
** AFNI version = AFNI_2011_12_21_1014 Compile date = Aug 27 2015
** [[Precompiled binary macosx_10.7_Intel_64: Aug 27 2015]]
** Program Death **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
Any ideas?
Many thanks.
