Hi Dr. Taylor and AFNI Gurus,
I've gone through your tutorial of FATCAT. I'm now trying pre-processing of DWI by Tortoise. I've 12 T2 and 64 DWI. The program seems work well (revealed by real-time console).
I've got 6 folders (DTI_up_rpd_corims, DTI_up_RAWFLOAT, DTI_up.list_deformation_field_output, DTI_slices, DTI_DMC_noise_info and DTI_DMC_corims) and a bunch of files. Since I'm new to Tortoise, I have no idea what to do next (using to3d stuff?).
May I ask how to construct the the brick bucket from the output of Tortoise, like AVEB0_DWI.nii.gz in your FATCAT demonstration?
Thanks for your help in advance, JoJo
