Hi Afni Experts,
I fixed one issue by adding the suffix .niml.dset to the prefix as suggested by a different post. I was able to execute the command but I ran into a different issue, even after updating the binaries:
The glf line is causing issues. When I remove it and just run the glt lines it is ok. Otherwise I get the following error: Error in glfRes[[ii]]$Df : $ operator is invalid for atomic vectors
Essentially I want to use the F-test in order to test between the 3 groups. Is there something wrong in my equation for this? The command is below:
3dMVM -prefix Lthickness.niml.dset -jobs 12 \
-bsVars "Group+Age+Gender+Education" \
-qVars "Age,Education" \
-num_glf 1 \
-glfLabel 1 group_Lthickness -glfCode 1 'Group : 1*HC -1*PAT1 & 1*HC -1*PAT2 & 1*PAT1 -1*PAT2' \
-num_glt 3 \
-gltLabel 1 HCvsPD -gltCode 1 'Group : 1*HC -1*PAT1' \
-gltLabel 2 HCvsMCI -gltCode 2 'Group : 1*HC -1*PAT2' \
-gltLabel 3 PDvsMCI -gltCode 3 'Group : 1*PAT1 -1*PAT2' \
-dataTable \
Subj Group Age Gender Education InputFile \
HC_1 HC 70 Female 13 ./HC/Lthickness15/HC_1.lh.thickness.fwhm15.fsaverage.gii'[0]' \
HC_2 HC 63 Female 16 ./HC/Lthickness15/HC_2.lh.thickness.fwhm15.fsaverage.gii'[0]' \
....
PAT1_13 PAT1 64 Female 21 ./PAT1/Lthickness15/PAT1_13.lh.thickness.fwhm15.fsaverage.gii'[0]'
...
PAT2_23 PAT2 66 Male 20 ./PAT2/Lthickness15/PAT2_23.lh.thickness.fwhm15.fsaverage.gii'[0]'
Edited 2 time(s). Last edit at 04/24/2016 09:09AM by AjaySK.
