Updating AFNI at least allowed me to get a more informative error message:
atlas2.cmrr.umn.edu 114> tcsh MVM3
Loading required package: lme4
Loading required package: Matrix
Loading required package: reshape2
Loading required package: lsmeans
Loading required package: estimability
************
Welcome to afex. Important changes in the current version:
- Functions for ANOVAs have been renamed to: aov_car(), aov_ez(), and aov_4().
- ANOVA functions return an object of class 'afex_aov' as default, see: ?aov_car
- 'afex_aov' objects can be passed to lsmeans for contrasts and follow-up tests.
- Reset previous (faster) behavior via: afex_options(return_aov='nice')
- Many more arguments can now be set globally via options, see: afex_options()
************
Loading required package: car
Error in library("robustbase") : there is no package called \u2018robustbase\u2019
Execution halted
Here is the output of afni_system_check.py:
atlas2.cmrr.umn.edu 113> afni_system_check.py -check_all
-------------------------------- general ---------------------------------
architecture: 64bit ELF
system: Linux
release: 2.6.32-504.8.1.el6.x86_64
version: #1 SMP Fri Dec 19 12:09:25 EST 2014
distribution: Red Hat Enterprise Linux Server 6.7 Santiago
number of CPUs: 32
apparent login shell: tcsh
shell RC file: .cshrc (exists)
--------------------- AFNI and related program tests ---------------------
which afni : /home/orochi-raid1/pburton/afni_08122015/afni
afni version : Precompiled binary linux_openmp_64: May 4 2016
AFNI_version.txt : AFNI_16.1.13, linux_openmp_64, May 04 2016
which python : /usr/bin/python
python version : 2.6.6
which R : /usr/bin/R
R version : R version 3.2.3 (2015-12-10) -- "Wooden Christmas-Tree"
which tcsh : /bin/tcsh
instances of various programs found in PATH:
afni : 1 (/home/orochi-raid1/pburton/afni_08122015/afni)
R : 1 (/usr/bin/R)
python : 1 (/usr/bin/python)
testing ability to start various programs...
afni : success
suma : success
3dSkullStrip : success
uber_subject.py : success
3dAllineate : success
3dRSFC : success
SurfMesh : success
checking for R packages...
rPkgsInstall -pkgs ALL -check : success
checking for $HOME files...
.afnirc : found
.sumarc : missing
.afni/help/all_progs.COMP : found
------------------------------ python libs -------------------------------
++ module 'PyQt4' found at /usr/lib64/python2.6/site-packages/PyQt4
++ module loaded: PyQt4
-------------------------------- env vars --------------------------------
PATH = /home/orochi-raid1/pburton/afni_08122015:/opt/local/fix1.06/fix1.06:/opt/local/fsl-5.0.7/fsl/bin:/opt/local/mricron-2012-07/x86_64:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/NX/bin:/usr/X11R6/bin:/usr/NX/bin
PYTHONPATH =
R_LIBS =
LD_LIBRARY_PATH = /opt/local/cuda-5.5/lib64:/opt/local/fsl-5.0.7/fsl/lib
DYLD_LIBRARY_PATH =
DYLD_FALLBACK_LIBRARY_PATH =
------------------------------ data checks -------------------------------
data dir : missing AFNI_data6
data dir : missing suma_demo
data dir : missing FATCAT_DEMO
data dir : missing afni_handouts
atlas : found TT_N27+tlrc under ./
------------------------------ OS specific -------------------------------
which yum : /usr/bin/yum
yum version : 3.2.29
============================ summary comments ============================
* consider running "suma -update_env" for .sumarc
* insufficient data for AFNI bootcamp