AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
September 16, 2016 08:37PM
Hi BFair,

Bob just added an ability to 3dttest++ that should
alleviate this problem. Like perhaps 26 other
programs now, if the final argument to 3dttest++
is "-@", then it will read the contents of a text
file as if it were provided on the command line.

So given your sample command in the post, you
should be able to do some thing like putting the
following in a text file, say 3dttest++.args.txt:

-setA GroupA 
000000022453 /Users/bfair/Documents/Im/Im_Task_Activations/Con_10_arc001/processed/spmstatsintra/000000022453/SessionB/EPI_short_MID/swea/con_0010.nii 
000000075717 /Users/bfair/Documents/Im/Im_Task_Activations/Con_10_arc001/processed/spmstatsintra/000000075717/SessionB/EPI_short_MID/swea/con_0010.nii

(and note that there are no '\' characters at the
ends of the lines in the text file), and then run
3dttest++ as follows:

3dttest++ -overwrite -@ < 3dttest++.args.txt

If you give that a try, please let us know how it goes.
For that to work, please use the now updated AFNI
binaries.

To repeat, that -@ option should be the last one
passed to the main program, as is done with this
example.

Thanks,

- rick
Subject Author Posted

3dttest++: Argument list too long

bfair September 14, 2016 01:39PM

Re: 3dttest++: Argument list too long

rick reynolds September 14, 2016 03:55PM

Re: 3dttest++: Argument list too long

rick reynolds September 16, 2016 08:37PM

Re: 3dttest++: Argument list too long

bfair September 21, 2016 02:08PM

Re: 3dttest++: Argument list too long

bfair December 08, 2016 10:52AM

Re: 3dttest++: Argument list too long

bfair December 08, 2016 12:22PM

Re: 3dttest++: Argument list too long

Bob Cox December 08, 2016 01:03PM