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January 07, 2017 02:54PM
Hi
I have several .nii files for a single object and I'm trying to put them in a single file. When I use
3dTcat -tr 3.0 -prefix output+orig *.nii
everything works fine and the program generates 2 files for me. But I have two questions:

1: My slices are interleaved, how can I specify it in 3dTcat? I know that I should use something like this " fred+orig[0..$(2),1..$(2)] " but I don't know where to put this sentence.

2: Is there anyway of generating a single .nii.gz file instead of a BRIK and a HEAD file?
Subject Author Posted

How to specify interleaved slices in 3dTcat

heretic133 January 07, 2017 02:54PM

Re: How to specify interleaved slices in 3dTcat

rick reynolds January 07, 2017 05:37PM