afni.nimh.nih.gov

Hi Yu,

The only special part here should be in aligning the
EPI and anat. For that, pass one of the -partial_*
options to align_epi_anat.py.

Note that you cannot specify this in the GUI (though
you can edit the afni_proc.py command that it
creates in the GUI). It would be better to take the
afni_proc.py command and work from there.

- rick