afni.nimh.nih.gov

Hi Jogi,

There should be a tiny difference in EPI to
anat alignment of course, but I would expect
the registration of the anat to the template to
be identical, meaning the ROIs should still
be in alignment.

Did you actually compare these in the afni
GUI? Did you compare the final_anat+tlrc
dataset between the two methods, and how
the ROI overlays them?

- rick