Hi Peter -

I have the exact same error happening. I'm running Mac Sierra, and I have updated to all the latest @afni_update_binaries. I've run freesurfer recon_all with no issue, but can't get past this dyld library error at the end of @SUMA_make_spec_FS -sid AmpCon006

I do have my freesurfer license installed in the appropriate directory.

Thanks in advance for your help!
Steffie

Here is my error language:
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writing to /Applications/freesurfer/subjects/AmpCon006/./SUMA/wm.seg.nii...
++ 3drefit: AFNI version=AFNI_17.0.13 (Mar  3 2017) [64-bit]
++ Authored by: RW Cox
++ Processing AFNI dataset ./wm.seg.nii
 + loading and re-writing dataset ./wm.seg.nii (./wm.seg.nii in NIFTI storage)
++ 3drefit processed 1 datasets
-- running 'mris_convert lh.smoothwm lh.smoothwm.asc'
Abort
dyld: lazy symbol binding failed: Symbol not found: ___emutls_get_address
  Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib
  Expected in: /usr/lib/libSystem.B.dylib

dyld: Symbol not found: ___emutls_get_address
  Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib
  Expected in: /usr/lib/libSystem.B.dylib

failure: could not create surface lh.smoothwm.asc

--> is your FreeSurfer license installed?
program failure: exiting...

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afni_system_check.py -check_all

-------------------------------- general ---------------------------------
architecture:         64bit 
system:               Darwin
release:              16.4.0
version:              Darwin Kernel Version 16.4.0: Thu Dec 22 22:53:21 PST 2016; root:xnu-3789.41.3~3/RELEASE_X86_64
distribution:         10.12.3 x86_64
number of CPUs:       8
apparent login shell: tcsh
shell RC file:        .cshrc (exists)

--------------------- AFNI and related program tests ---------------------
which afni           : /Users/steffie/abin/afni
afni version         : Precompiled binary macosx_10.7_local: Mar  3 2017 
                     : AFNI_17.0.13
AFNI_version.txt     : AFNI_17.0.13, macosx_10.7_local, Mar 03 2017
which python         : /usr/bin/python
python version       : 2.7.10
which R              : /usr/local/bin/R
R version            : R version 3.3.2 (2016-10-31) -- "Sincere Pumpkin Patch"
which tcsh           : /bin/tcsh

instances of various programs found in PATH:
    afni    : 1   (/Users/steffie/abin/afni)
    R       : 1   (/Library/Frameworks/R.framework/Versions/3.3/Resources/bin/R)
    python  : 1   (/usr/bin/python)
    python2 : 0 
    python3 : 1   (/usr/local/Cellar/python3/3.6.0/Frameworks/Python.framework/Versions/3.6/bin/python3.6)

** have python3 but not python2

testing ability to start various programs...
    afni                 : success
    suma                 : success
    3dSkullStrip         : success
    uber_subject.py      : success
    3dAllineate          : success
    3dRSFC               : success
    SurfMesh             : success

checking for R packages...
    rPkgsInstall -pkgs ALL -check : success

checking for $HOME files...
    .afnirc                   : found
    .sumarc                   : found
    .afni/help/all_progs.COMP : found

------------------------------ python libs -------------------------------
** python module not found: PyQt4

-------------------------------- env vars --------------------------------
PATH = /Applications/freesurfer/bin:/Applications/freesurfer/fsfast/bin:/Applications/freesurfer/tktools:/Applications/freesurfer/mni/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Users/steffie/abin

PYTHONPATH = /usr/local/lib/python2.7/site-packages

R_LIBS = 
LD_LIBRARY_PATH = 
DYLD_LIBRARY_PATH (sub-shell) = /opt/X11/lib/flat_namespace
DYLD_FALLBACK_LIBRARY_PATH (sub-shell) = /Users/steffie/abin

------------------------------ data checks -------------------------------
data dir : missing AFNI_data6
data dir : missing AFNI_demos
data dir : missing suma_demo
data dir : missing afni_handouts
atlas    : found TT_N27+tlrc  under /Users/steffie/abin

------------------------------ OS specific -------------------------------
which brew           : /usr/local/bin/brew
brew version         : Homebrew 1.1.7

++ found 1 dylib files under '/opt/X11/lib/flat_namespace'
   -- found 'libXt' dylib files:
      /opt/X11/lib/flat_namespace/libXt.6.dylib
-- recent OS X, cannot check DYLD_LIBRARY_PATH in cur shell, cheating ...
++ found evar DYLD_LIBRARY_PATH = /opt/X11/lib/flat_namespace

=========================  summary, please fix:  =========================
*  insufficient data for AFNI bootcamp
*  note: pyqt4 is no longer available via brew
*  consider linking /usr/local/Cellar/gcc/6.3.0_1/lib/gcc/6/libgomp.1.dylib under /usr/local/lib
*  consider linking /usr/local/Cellar/glib/2.50.2/lib/libglib-2.0.dylib under /usr/local/lib

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