AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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herrlich10
March 30, 2017 10:19PM
Dear experts,

For an EPI dataset, there is slice timing information in the .HEAD file. However, I couldn't find similar information in the header read by dicom_hdr from the raw dicom file (in case it is relevant, I have only one *.IMA file per volume).

So how does to3d determine the slice order (i.e., based on which item in the dicom header)? Is this information reliable if given?

Thanks!
Best wishes,
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Subject Author Posted

How does to3d determine the slice order?

herrlich10 March 30, 2017 10:19PM

Re: How does to3d determine the slice order?

rick reynolds March 31, 2017 08:42AM

Re: How does to3d determine the slice order?

herrlich10 March 31, 2017 10:48PM

Re: How does to3d determine the slice order?

rick reynolds April 01, 2017 10:55AM