I downloaded a directory of anatomical scans from an online dataset. I'm having an issue when I try to standardize these images from native space to MNI space. I have successfully used SSwarper in the past so I would like to know if my issue is more afni-related or with the scans I'm trying to process.
The script I used:

@SSwarper -input 1_MPRAGE+orig -base $File_Path/MNI152_2009_template_SSW.nii.gz -subid $subj_number

There's a cascade of errors in the process that result from junk.SSwarper.2ovuXrwwb3N_TAL5.nii not being output. I get a series of "can't open dataset ./junk.SSwarper.2ovuXrwwb3N_TAL5.nii " fatal errors. I tried double checking the terminal log with one of my successful uses of SSwarper and the main difference I see is during the 3dQwarp section. I get the following warning/errors in my failed unsuccessful attempts:


++ 3dQwarp: replacing source dataset with 3dAllineate result ./junk.SSwarper.2ovuXrwwb3N_TAL5_Allin.nii

+ 3dAllineate output files have been renamed

# mat44 3dAllineate matrix:

0.868885 0.003196 -0.021110 -246.061996

-0.022162 0.892608 0.201009 -270.204987

0.016392 -0.186738 0.811656 540.333008

++ Dataset zero-pad: xbot=549 xtop=548 ybot=543 ytop=552 zbot=549 ztop=543 voxels

*+ WARNING: At least one padding is more than 50% of dataset grid size!

*+ WARNING: Alignment of dataset grid centers might help a LOT: @Align_Centers

** ERROR: EDIT_volpad: Can't malloc space for new array

** ERROR: EDIT_volpad: Can't malloc space for new array

Fatal Signal 11 (SIGSEGV) received

3dQwarp

Bottom of Debug Stack

** AFNI version = AFNI_19.1.09 Compile date = May 17 2019

** [[Precompiled binary macos_10.12_local: May 17 2019]]

** Program Death **


I appreciate any help you could provide!