AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
September 08, 2017 08:22AM
Howdy-

Stepping back a pace, what kinds of images are you aligning, and what AFNI functions are you using for this?

There is AFNI functionality for doing manual adjustment (the "nudge"ing plug-in: open AFNI -> click "Define Datamode", a button in the middle, then click "Plugins" in the lower right of the panel that opens, and select "Nudge Dataset" in then menu that opens), as well as 3drotate on the commandline, which might be useful.

However, it might be better (both for the current alignments and in the longer term) to sort out alignment on the command line.

-pt
Subject Author Posted

Manual realignment

gchahine September 07, 2017 10:46PM

Re: Manual realignment

ptaylor September 08, 2017 08:22AM

Re: Manual realignment

gchahine September 08, 2017 09:08AM

Re: Manual realignment

ptaylor September 08, 2017 09:47AM

Re: Manual realignment

gchahine September 08, 2017 07:18PM

Re: Manual realignment

gchahine September 09, 2017 07:22AM

Re: Manual realignment

RWCox September 08, 2017 11:22AM

Re: Manual realignment

rosaann September 14, 2017 04:00AM

Re: Manual realignment

RWCox September 14, 2017 06:25AM