AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 14, 2017 04:00AM
thank you for your helpful subject , but I have a question.

I have a dataset which the writers of paper said for normalization wh did this step
>>>Structural images were normalized (spatially warped) to a standard
template brain (the MNI avg152T1.img) using SPM2 software (Wellcome Department of
Cognitive Neurology, UCL) using default options (7 x 8 x 7 nonlinear basis functions), and the
warping parameters were applied to functional images for each subject.

my question is: how can I do this in SPM? I should normalize structural image to MNIavg152T1, but in spm12 , normalization (estimate), there is no chois for MNI template!!!
Kind regards,Bestia



Edited 2 time(s). Last edit at 09/27/2017 06:29AM by rosaann.
Subject Author Posted

Manual realignment

gchahine September 07, 2017 10:46PM

Re: Manual realignment

ptaylor September 08, 2017 08:22AM

Re: Manual realignment

gchahine September 08, 2017 09:08AM

Re: Manual realignment

ptaylor September 08, 2017 09:47AM

Re: Manual realignment

gchahine September 08, 2017 07:18PM

Re: Manual realignment

gchahine September 09, 2017 07:22AM

Re: Manual realignment

RWCox September 08, 2017 11:22AM

Re: Manual realignment

rosaann September 14, 2017 04:00AM

Re: Manual realignment

RWCox September 14, 2017 06:25AM