AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 25, 2017 12:19PM
Okay!

So I am trying out more things with the align_epi_anat.py script. I have tried 3dcopying the anatomy files from /opt/afni/ to my working directory. I have also tried adding -cost lpa (which supposedly estimates transforms better when going from anatomy to anatomy).

It's running now and the result is... "Finished alignment successfully"!!!

Great, thank you so much for the help and all the hard work you guys must have put into afni, documentation, and monitoring this message board! We really appreciate it.

Best,
Kirk
Subject Author Posted

Making ROIs (masks) in MNI space

Kirk September 27, 2017 10:44AM

Re: Making ROIs (masks) in MNI space

Daniel Glen September 29, 2017 04:32PM

Re: Making ROIs (masks) in MNI space

Kirk October 06, 2017 11:38AM

Re: Making ROIs (masks) in MNI space

Kirk October 24, 2017 07:13PM

Re: Making ROIs (masks) in MNI space

Kirk October 25, 2017 12:19PM

Re: Making ROIs (masks) in MNI space

Daniel Glen October 25, 2017 04:03PM