AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 19, 2017 01:39PM
Hi there, back again with another newbie question that I cant seem to find an answer to within the SUMA pdf. I have recently begun working with SUMA and was curious about the manner in which to map the volumetric data to the surface. To start I used FreeSurfer to create the surface models for my subjects and @SUMAMAKESPECFS worked perfectly to create my appropriate files. From there I also used @SUMA_AlignToExperiment for my surface and experimental anat files with no problems. The next step in the pdf just states to map your volumetric data to to surface using command line or interactively. That said I tried this and the results were terrible. So taking a step back I reran my data using the anat from @SUMA_Align and removed the align and tlrc. sections. This actually produced data that mapped onto the surface anat pretty much perfectly. However, being new to this I cant help but feel like I am missing a crucial step to make the process even better. I found 3dVol2Surf but haven't fully deciphered the help file from that yet. Just looking for some input on this, thanks in advance 8).
Subject Author Posted

SUMA Volume Data to Surface Data

Lordbyron001 October 19, 2017 01:39PM

Re: SUMA Volume Data to Surface Data

Daniel Glen October 19, 2017 01:53PM

Re: SUMA Volume Data to Surface Data

Lordbyron001 October 19, 2017 02:09PM

Re: SUMA Volume Data to Surface Data

rick reynolds October 19, 2017 04:22PM

Re: SUMA Volume Data to Surface Data

Lordbyron001 October 19, 2017 06:51PM

Re: SUMA Volume Data to Surface Data

rick reynolds October 19, 2017 08:42PM

Re: SUMA Volume Data to Surface Data

Lordbyron001 October 20, 2017 12:18PM

Re: SUMA Volume Data to Surface Data

Lordbyron001 October 20, 2017 07:55PM

Re: SUMA Volume Data to Surface Data

Lordbyron001 October 26, 2017 09:38PM

Re: SUMA Volume Data to Surface Data

Daniel Glen October 27, 2017 04:45PM