AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
February 22, 2018 03:21PM
Thank you again for your help, I very much appreciate it.

The information was both from the same computer. Could it be an issue with the layout of my data table? I tried including the table as a separate file now and am getting the following error (I have also copied the data table below the error message):

...
-gltCode 4 Session : -1*T1 1*T2 Anxiety : -dataTable @datatable.txt
Read 263 items
Error in if (len%%wd != 0) errex.AFNI(paste("The content under -dataTable is not rectangular !", :
argument is of length zero
Calls: process.LME.opts
In addition: Warning messages:
1: In scan(ff, what = "character", na.strings = "") :
EOF within quoted string
2: In scan(ff, what = "character", na.strings = "") :
embedded nul(s) found in input
3: In grep("[^\\\\]", opts) : input string 1 is invalid in this locale
Execution halted

---------------

Here is the data table:

Subj Session Anxiety InputFile \
4027 T1 16 /Applications/freesurfer/ERT/subs/04027_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4034 T1 19 /Applications/freesurfer/ERT/subs/04034_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4035 T1 23 /Applications/freesurfer/ERT/subs/04035_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4040 T1 28 /Applications/freesurfer/ERT/subs/04040_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4041 T1 18 /Applications/freesurfer/ERT/subs/04041_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4043 T1 11 /Applications/freesurfer/ERT/subs/04043_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4054 T1 17 /Applications/freesurfer/ERT/subs/04054_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4056 T1 23 /Applications/freesurfer/ERT/subs/04056_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4057 T1 19 /Applications/freesurfer/ERT/subs/04057_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4059 T1 28 /Applications/freesurfer/ERT/subs/04059_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4060 T1 25 /Applications/freesurfer/ERT/subs/04060_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4065 T1 32 /Applications/freesurfer/ERT/subs/04065_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4070 T1 30 /Applications/freesurfer/ERT/subs/04070_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4071 T1 26 /Applications/freesurfer/ERT/subs/04071_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4072 T1 33 /Applications/freesurfer/ERT/subs/04072_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4073 T1 30 /Applications/freesurfer/ERT/subs/04073_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4074 T1 25 /Applications/freesurfer/ERT/subs/04074_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4076 T1 20 /Applications/freesurfer/ERT/subs/04076_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4079 T1 30 /Applications/freesurfer/ERT/subs/04079_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4080 T1 25 /Applications/freesurfer/ERT/subs/04080_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4082 T1 28 /Applications/freesurfer/ERT/subs/04082_pre/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4020 T2 45 /Applications/freesurfer/ERT/subs/04020_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4027 T2 35 /Applications/freesurfer/ERT/subs/04027_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4034 T2 53 /Applications/freesurfer/ERT/subs/04034_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4035 T2 42 /Applications/freesurfer/ERT/subs/04035_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4040 T2 27 /Applications/freesurfer/ERT/subs/04040_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4041 T2 45 /Applications/freesurfer/ERT/subs/04041_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4043 T2 33 /Applications/freesurfer/ERT/subs/04043_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4054 T2 54 /Applications/freesurfer/ERT/subs/04054_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4056 T2 33 /Applications/freesurfer/ERT/subs/04056_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4057 T2 18 /Applications/freesurfer/ERT/subs/04057_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4059 T2 46 /Applications/freesurfer/ERT/subs/04059_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4060 T2 31 /Applications/freesurfer/ERT/subs/04060_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4065 T2 49 /Applications/freesurfer/ERT/subs/04065_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4070 T2 44 /Applications/freesurfer/ERT/subs/04070_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4071 T2 33 /Applications/freesurfer/ERT/subs/04071_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4072 T2 34 /Applications/freesurfer/ERT/subs/04072_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4073 T2 42 /Applications/freesurfer/ERT/subs/04073_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4074 T2 35 /Applications/freesurfer/ERT/subs/04074_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4076 T2 39 /Applications/freesurfer/ERT/subs/04076_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4079 T2 28 /Applications/freesurfer/ERT/subs/04079_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4080 T2 47 /Applications/freesurfer/ERT/subs/04080_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz \
4082 T2 31 /Applications/freesurfer/ERT/subs/04082_post/MattsScript_results/PCC_seed.maskConnData.Z.nii.gz
Subject Author Posted

3dLME for pre-post intervention design

AFNIbeginner February 21, 2018 03:24PM

Re: 3dLME for pre-post intervention design

gang February 21, 2018 05:56PM

Re: 3dLME for pre-post intervention design

AFNIbeginner February 21, 2018 06:52PM

Re: 3dLME for pre-post intervention design

gang February 22, 2018 11:51AM

Re: 3dLME for pre-post intervention design

AFNIbeginner February 22, 2018 03:21PM

Re: 3dLME for pre-post intervention design

gang February 22, 2018 03:50PM

Re: 3dLME for pre-post intervention design

AFNIbeginner February 27, 2018 03:07PM

Re: 3dLME for pre-post intervention design

gang February 28, 2018 03:32PM

Re: 3dLME for pre-post intervention design

AFNIbeginner March 01, 2018 03:48PM

Re: 3dLME for pre-post intervention design

gang March 02, 2018 09:07AM

Re: 3dLME for pre-post intervention design

AFNIbeginner March 05, 2018 01:24PM

Re: 3dLME for pre-post intervention design

AFNIbeginner March 07, 2018 02:16PM

Re: 3dLME for pre-post intervention design

gang March 08, 2018 01:18PM

Re: 3dLME for pre-post intervention design

AFNIbeginner March 12, 2018 08:05PM

Re: 3dLME for pre-post intervention design

gang March 13, 2018 05:39PM

Re: 3dLME for pre-post intervention design

AFNIbeginner March 14, 2018 12:08PM

Re: 3dLME for pre-post intervention design

AFNIbeginner April 06, 2018 12:18PM

Re: 3dLME for pre-post intervention design

gang April 06, 2018 04:17PM

Re: 3dLME for pre-post intervention design

AFNIbeginner April 06, 2018 06:30PM

Re: 3dLME for pre-post intervention design

gang April 09, 2018 09:36AM

Re: 3dLME for pre-post intervention design

AFNIbeginner April 09, 2018 01:17PM

Re: 3dLME for pre-post intervention design

AFNIbeginner April 14, 2018 08:48AM

Re: 3dLME for pre-post intervention design

gang April 16, 2018 09:57AM

Re: 3dLME for pre-post intervention design

AFNIbeginner April 16, 2018 12:00PM

Re: 3dLME for pre-post intervention design

gang April 16, 2018 03:39PM

Re: 3dLME for pre-post intervention design

AFNIbeginner April 16, 2018 04:21PM