AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 07, 2018 11:50AM
> I assume that you have more than two subjects as input.

Yes, I just wanted to run a dummy before inputting the larger dataset.

> There should have more than one sub-brick in the output. The one with the label 'Subj' is the ICC you're looking for.

So the ICC map under 'Subj' sub-brick can be interpreted as what? What is the typical threshold for the map?

> This is a whole-brain voxel-wise ICC analysis. I'm not so sure what you're asking. If you want to the ICC for a particular list of ROIs, you can extract them from the whole brain analysis results.

how would you do that?
Subject Author Posted

Understanding 3dLME output for ICC

rolinskira September 06, 2018 04:52PM

Re: Understanding 3dLME output for ICC

gang September 07, 2018 09:54AM

Re: Understanding 3dLME output for ICC

rolinskira September 07, 2018 11:50AM

Re: Understanding 3dLME output for ICC

gang September 10, 2018 01:53PM

Re: Understanding 3dLME output for ICC

rolinskira September 18, 2018 04:16PM

Re: Understanding 3dLME output for ICC

gang September 19, 2018 03:35PM

Re: Understanding 3dLME output for ICC

rolinskira October 18, 2018 02:26PM