AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

Previous Message Next Message
Message List New Topic Print View
|
Naveed
December 19, 2018 03:14PM
Hello,

I want to insert a label table in the final connectivity matrix.
I generated the connectivity matrices and I am using the DKT parcellation files generated from freesurfer for the in_rois in 3dNetCorr script using the following command:

3dNetCorr -prefix netcorr -mask mask_GM_resam+orig.BRIK -ts_out -fish_z -inset errts_DKT_fs+orig -in_rois DKT_resample+orig -output_mask_nonnull -push_thru_many_zeros -ts_wb_corr -prefix netcor_output/

fat_mat_sel.py --matr_in _000.netcc --Pars="CC" --A_plotmin=0.27 --B_plotmax=1 --Tight_layout_on --dpi_file=75 -L 2 -d 300 -S 2

What is the proper way to do it?
Reply Quote
RSS
Subject Author Posted

Labletable in an ROI file

Naveed December 19, 2018 03:14PM

Re: Labletable in an ROI file

ptaylor December 19, 2018 03:41PM

Re: Labletable in an ROI file

Naveed December 19, 2018 04:04PM

Re: Labletable in an ROI file

Naveed December 20, 2018 04:31PM

Re: Labletable in an ROI file

ptaylor December 20, 2018 04:40PM

Re: Labletable in an ROI file

Naveed December 20, 2018 04:50PM

Re: Labletable in an ROI file

ptaylor December 20, 2018 05:32PM

Re: Labletable in an ROI file

Naveed December 20, 2018 10:29PM

Re: Labletable in an ROI file

ptaylor December 21, 2018 08:54AM

Re: Labletable in an ROI file

ptaylor December 21, 2018 08:58AM

Re: Labletable in an ROI file

Naveed December 21, 2018 09:18AM

Re: Labletable in an ROI file

ptaylor December 21, 2018 09:23AM

Re: Labletable in an ROI file

ptaylor December 21, 2018 10:29AM