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Sincerely, AFNI HQ

History of AFNI updates  

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December 20, 2018 04:31PM
Hi Paul,
I made the label table with ROIs and the 3dNetCorr. Can you please let me know why the arrangement of labels in the output file is not correct. it should look like this for correct plotting with fat_mat_sel.py
# 75 # Number of network ROIs
# 2 # Number of netcc matrices
# WITH_ROI_LABELS
l_HC l_ENTH l_AG l_THAL l_CAUD l_PUTA l_PALL l_ACUM l_cACC l_cMFC l_CUN l_FG l_IP l_infTC l_isthCC l_OC l_latOFC l_LING l_medOFC l_midTC l_paraHC l_paraCent l_parsOPC l_parsORB l_parsTRI l_periCalc l_postCent l_PCC l_preCent l_PCUN l_rACC l_rmidFC l_SF l_SP l_supTC l_supraMG l_transTC l_insula r_HC r_ENTH r_AG r_THAL r_CAUD r_PUTA r_ACUM r_cACC r_cMFC r_CUN r_FG r_IP r_infTC r_isthCC r_OC r_latOFC r_LING r_medOFC r_midTC r_paraHC r_paraCent r_parsOPC r_parsORB r_parsTRI r_periCalc r_postCent r_PCC r_preCent r_PCUN r_rACC r_rmidFC r_SF r_SP r_supTC r_supraMG r_transTC r_insula
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76
# CC
1.0000 0.2930 0.2618 0.1602 0.2252 0.2329 0.0053 -0.0236 0.2610 0.3930 0.3828 0.5971 0.6453 0.5672 0.5194 0.4463 0.2827 0.4747 0.3154 0.5589 0.3885 0.4375 0.2431 0.4167 0.3031 0.4576 0.5394 0.3068 0.5241 0.5965 0.1410 0.3969 0.5253 0.5576 0.4806 0.4609 0.3417 0.4302 0.5698 0.2076 0.2415 0.1757 0.2298 0.2368 0.0475 0.1693 0.4412 0.4170 0.5389 0.5736 0.5673 0.4129 0.4158 0.4562 0.4585 0.3164 0.5369 0.3122 0.4774 0.3446 0.4415 0.3253 0.4657 0.4514 0.2422 0.5478


However, my output files are generated in this form and I have to rearrange the labels manually for each file. Can you please let me know where I am making a mistake?

# 74 # Number of network ROIs
# 2 # Number of netcc matrices
# WITH_ROI_LABELS
l_HC
l_ENTH
l_AG
l_THAL
l_CAUD
l_PUTA
l_ACUM
l_cACC
l_cMFC
l_CUN
l_FG
l_IP
l_infTC
l_isthCC
l_OC
l_latOFC
l_LING
l_medOFC
l_midTC
l_paraHC
l_paraCent
l_parsOPC
l_parsORB
l_parsTRI
l_periCalc
l_postCent
l_PCC
l_preCent
l_PCUN
l_rACC
l_rmidFC
l_SF
l_SP
l_supTC
l_supraMG
l_transTC
l_insula
r_HC
r_ENTH
r_AG
r_THAL
r_CAUD
r_PUTA
r_ACUM
r_cACC
r_cMFC
r_CUN
r_FG
r_IP
r_infTC
r_isthCC
r_OC
r_latOFC
r_LING
r_medOFC
r_midTC
r_paraHC
r_paraCent
r_parsOPC
r_parsORB
r_parsTRI
r_periCalc
r_postCent
r_PCC
r_preCent
r_PCUN
r_rACC
r_rmidFC
r_SF
r_SP
r_supTC
r_supraMG
r_transTC
r_insula

1 2 3 4 5 6 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76
# CC
1.0000 0.5484 0.6696 0.3177 0.1300 0.2092 0.0221 0.1795 0.3297 0.4257 0.4496 0.3178 0.0160 0.4467 0.0559 0.1825 0.6739 0.4040 0.1962 0.2034 0.1744 -0.2144 -0.2018 -0.4397 0.4416 0.2290 0.1993 0.1571 0.5279 -0.1066 0.0829 0.2763 0.2152 0.6014 -0.0272 0.4296 0.2116 0.8999 0.4668 0.7927 0.1417 -0.0310 0.2667 0.3616 0.1497 0.2404 0.2598 0.4097 0.2180 0.1839 0.3100 0.0710 0.4058 0.4294 -0.0207 0.4097 0.7305 0.3040 -0.2437 0.1626 -0.1619 0.3771 0.2375 0.2715 0.1674 0.4316 -0.0865 -0.1020 0.1848 0.2654 0.2551 -0.0270 0.3550 0.1052
0.5484 1.0000
Subject Author Posted

Labletable in an ROI file

Naveed December 19, 2018 03:14PM

Re: Labletable in an ROI file

ptaylor December 19, 2018 03:41PM

Re: Labletable in an ROI file

Naveed December 19, 2018 04:04PM

Re: Labletable in an ROI file

Naveed December 20, 2018 04:31PM

Re: Labletable in an ROI file

ptaylor December 20, 2018 04:40PM

Re: Labletable in an ROI file

Naveed December 20, 2018 04:50PM

Re: Labletable in an ROI file

ptaylor December 20, 2018 05:32PM

Re: Labletable in an ROI file

Naveed December 20, 2018 10:29PM

Re: Labletable in an ROI file

ptaylor December 21, 2018 08:54AM

Re: Labletable in an ROI file

ptaylor December 21, 2018 08:58AM

Re: Labletable in an ROI file

Naveed December 21, 2018 09:18AM

Re: Labletable in an ROI file

ptaylor December 21, 2018 09:23AM

Re: Labletable in an ROI file

ptaylor December 21, 2018 10:29AM