AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 13, 2019 05:58PM
align_epi_anat.py has some options for partial data that will try to avoid moving data out of plane, but that's still a difficult proposition with only four slices. It would be better to have a full coverage EPI dataset that is in alignment with the partial dataset and move the two together with the same affine transformation. In that case, the partial dataset would be a "child" dataset. In align_epi_anat.py, that would be implemented with the "-child_epi" option.
Subject Author Posted

alignment and standardization of 4 functional slices

ns May 13, 2019 03:56PM

Re: alignment and standardization of 4 functional slices

Daniel Glen May 13, 2019 05:58PM

Re: alignment and standardization of 4 functional slices

ns May 15, 2019 09:22AM

Re: alignment and standardization of 4 functional slices

Peter Molfese May 15, 2019 09:40AM