AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 02, 2019 04:01PM
That is helpful, I had been looking for something like that. It can be seen from a view of the list of events:

timing_tool.py -multi_timing stimuli/* -multi_timing_to_event_list GE:ALL -
or even
timing_tool.py -multi_timing stimuli/* -multi_timing_to_event_list GE:ALL - | grep voa

The voa events are always exactly 15.4 seconds (14 TRs) after every other event. Since these are TR-locked events and tents, and since the tents last 26 TRs, the first 11 TRs of the voa class (the first 11 regressors) will be exactly duplicated by the combination of the last 11 regressors from every other class. That is the multi-collinearity in the model, and it is why the condition number is high. It also explains why TENTzero did not help (removing the first and last regressors). There are 11 overlapping regressors, not just 2.

With fixed-shape basis functions, this model would be solvable, but not with all of the TENTs. Note that even sub-sampling the TENTs down to every 2 or 3 TRs might not be good enough, as there would still be the 12.1 seconds of consistent overlap. It would be helpful if there were some random jitter in the event timing.

- rick
Subject Author Posted

Strange TENT Betas

s1110a June 22, 2019 05:24PM

Re: Strange TENT Betas

rick reynolds June 24, 2019 12:36PM

Re: Strange TENT Betas

s1110a June 24, 2019 02:04PM

Re: Strange TENT Betas

s1110a June 24, 2019 02:19PM

Re: Strange TENT Betas

rick reynolds June 24, 2019 04:36PM

Re: Strange TENT Betas

s1110a June 24, 2019 05:08PM

Re: Strange TENT Betas

rick reynolds June 25, 2019 09:15AM

Re: Strange TENT Betas

s1110a June 25, 2019 11:31AM

Re: Strange TENT Betas

s1110a June 26, 2019 10:53AM

Re: Strange TENT Betas

rick reynolds June 26, 2019 11:42AM

Re: Strange TENT Betas

rick reynolds June 26, 2019 04:26PM

Re: Strange TENT Betas

s1110a June 26, 2019 06:32PM

Re: Strange TENT Betas

s1110a June 29, 2019 01:38PM

Re: Strange TENT Betas

rick reynolds July 01, 2019 09:06AM

Re: Strange TENT Betas

s1110a July 01, 2019 11:27AM

Re: Strange TENT Betas

s1110a July 02, 2019 02:49PM

Re: Strange TENT Betas

rick reynolds July 02, 2019 04:01PM

Re: Strange TENT Betas

s1110a July 02, 2019 06:03PM