AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 30, 2019 01:29PM
Another option would be to use gen_group_command.py to help write the 3dttest++ command. You can use shell wildcard expansion to list all datasets, and specify sub-bricks via labels. Consider this example from the class data, AFNI_data6/group_results/s5.ttest.paired :

gen_group_command.py -command 3dttest++ \
      -write_script s5.ttest.paired -prefix stat.5.ttest     \
      -dsets OLSQ.*.HEAD                         \
      -set_labels Vrel Arel                          \
      -subs_betas 'Vrel#0_Coef' 'Arel#0_Coef'   \
      -options -paired

See the "gen_group_command.py -help" output for more complex examples of 3dttest++ commands (example section A).

- rick
Subject Author Posted

List briks in bucket

navot July 30, 2019 10:58AM

Re: List briks in bucket

Peter Molfese July 30, 2019 11:05AM

Re: List briks in bucket

Daniel Glen July 30, 2019 12:15PM

Re: List briks in bucket

rick reynolds July 30, 2019 01:29PM