AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 27, 2020 02:00PM
Hi Gang,

Great - thank you! I realize this is probably overkill, but just to ensure my understanding of the models based on R only: would the following lme4 commands correspond to the 3dLME models of interest?
[condition = repeated measure of time, four levels (hour, day, week, month)]

Does the effect of forgetting (average D' for each condition across subjects) predict brain activity? This map would represent areas that vary with Dprime irregardless of the effect of condition.
lmer(activation~ (1 + Dprime) + condition)

>> 3dLME -prefix myOutput -jobs 8 \
-model "Dprime" \
-qVars "Dprime" \
-ranEff '~1+Dprime' \

When controlling for the effect of forgetting (average D' for each condition across subjects), does condition predict brain activity? This map would represent areas that vary across conditions when controlling for Dprime.
lmer(activation~ (1 + Dprime | condition))

>> 3dLME -prefix myOutput -jobs 8 \
-model "Dprime+condition" \
-qVars "Dprime" \
-ranEff '~1+Dprime' \
...
Subject Author Posted

Regression covariate question

Catherine Tallman January 21, 2020 08:41PM

Re: Regression covariate question

gang January 22, 2020 02:11PM

Re: Regression covariate question

Catherine Tallman January 22, 2020 02:35PM

Re: Regression covariate question

gang January 22, 2020 03:26PM

Re: Regression covariate question

Catherine Tallman January 23, 2020 05:26PM

Re: Regression covariate question

gang January 24, 2020 10:20AM

Re: Regression covariate question

Catherine Tallman January 27, 2020 02:00PM

Re: Regression covariate question

gang January 27, 2020 04:32PM

Re: Regression covariate question

Catherine Tallman January 30, 2020 02:03PM

Re: Regression covariate question

gang January 31, 2020 04:36PM