AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 18, 2020 08:02AM
Ah, now I am reading your original post more carefully, and I see the GSL version number differences I had skipped over... Interesting. What is your:
lsb_release -a
?

I also notice that your OS is Ubuntu, but you seem to be using the linux_openmp_64 binaries of AFNI. I wonder if you wouldn't have this issue if you used the Ubuntu version of AFNI binaries. Using the OpenMP ver might cause some issues with dependencies, I *think* one with libXp.so.6 if using the OpenMP_64 on Ubuntu. (And that might be the reason for the GSL enumeration differences, too, in the required links.)

I use the linux_ubuntu_12_64 on my Ubuntu 18.04.*, and that has been trouble-free with installations; note that is also *does* have OpenMP enabled for under-the-hood parallelization, similar to the linux_openmp_64 ones.

If you want to swap over, then you could:
@update.afni.binaries -package linux_ubuntu_12_64 -do_extras

Yep, the UCT Bootcamp was good times for all!

--pt
Subject Author Posted

Updated AFNI and no longer pass afni_system_check: libgsl.so.0: cannot open shared object file

Robin February 18, 2020 04:40AM

Re: Updated AFNI and no longer pass afni_system_check: libgsl.so.0: cannot open shared object file

Robin February 18, 2020 04:47AM

Re: Updated AFNI and no longer pass afni_system_check: libgsl.so.0: cannot open shared object file

ptaylor February 18, 2020 05:56AM

Re: Updated AFNI and no longer pass afni_system_check: libgsl.so.0: cannot open shared object file

Robin February 18, 2020 07:06AM

Re: Updated AFNI and no longer pass afni_system_check: libgsl.so.0: cannot open shared object file

ptaylor February 18, 2020 08:02AM

Re: Updated AFNI and no longer pass afni_system_check: libgsl.so.0: cannot open shared object file

Robin February 18, 2020 09:02AM

Re: Updated AFNI and no longer pass afni_system_check: libgsl.so.0: cannot open shared object file

ptaylor February 18, 2020 09:45AM