Hi there,
I included the the SPM/VBM grey matter output as a voxel-wise covariate in the ANOVA (3dMVM). After I ran the anova with the covariate, I didn't see any differences in the output relative to when no covariate was included. Below is the code I used. There were no error messages. Does this code look correct?
Thank you very much.
Code:
3dMVM -prefix Choice_VBM -jobs 4 \
-bsVars group \
-wsVars "phase*reinf" \
-vVars VBM \
-SS_type 3 \
-num_glt 19 \
-gltLabel 1 3way_inter -gltCode 1 'group : 1*pat -1*ctrl phase : 1*acq -1*rev reinf : 1*corr -1*incor' \
-gltLabel 2 group_phase -gltCode 2 'group : 1*pat -1*ctrl phase : 1*acq -1*rev' \
-gltLabel 3 group_reinf -gltCode 3 'group : 1*pat -1*ctrl reinf : 1*corr -1*incor' \
-gltLabel 4 phase_reinf -gltCode 4 'phase : 1*acq -1*rev reinf : 1*corr -1*incor' \
-gltLabel 5 group -gltCode 5 'group : 1*pat -1*ctrl' \
-gltLabel 6 phase -gltCode 6 'phase : 1*acq -1*rev' \
-gltLabel 7 reinf -gltCode 7 'reinf : 1*corr -1*incor' \
-gltLabel 8 acq_group -gltCode 8 'phase : 1*acq group : 1*pat -1*ctrl' \
-gltLabel 9 rev_group -gltCode 9 'phase : 1*rev group : 1*pat -1*ctrl' \
-gltLabel 10 corr_group -gltCode 10 'reinf : 1*corr group : 1*pat -1*ctrl' \
-gltLabel 11 incor_group -gltCode 11 'reinf : 1*incor group : 1*pat -1*ctrl' \
-gltLabel 12 acq_reinf -gltCode 12 'phase : 1*acq reinf : 1*corr -1*incor' \
-gltLabel 13 rev_reinf -gltCode 13 'phase : 1*rev reinf : 1*corr -1*incor' \
-gltLabel 14 corr_phase -gltCode 14 'reinf : 1*corr phase: 1*acq -1*rev' \
-gltLabel 15 incor_phase -gltCode 15 'reinf : 1*incor phase : 1*acq -1*rev' \
-gltLabel 16 group_acq_corr -gltCode 16 'group : 1*pat -1*ctrl phase : 1*acq reinf : 1*corr' \
-gltLabel 17 group_acq_incor -gltCode 17 'group : 1*pat -1*ctrl phase : 1*acq reinf : 1*incor' \
-gltLabel 18 group_rev_corr -gltCode 18 'group : 1*pat -1*ctrl phase : 1*rev reinf : 1*corr' \
-gltLabel 19 group_rev_incor -gltCode 19 'group : 1*pat -1*ctrl phase : 1*rev reinf : 1*incor' \
-dataTable \
Subj group phase reinf VBM InputFile \
6292 pat acq corr 6292/VBM_6292+tlrc 6292/Proc_FIRST_3RUNS_6292_April2019.results/6292_RevP_acq_corr+tlrc \
6292 pat acq incor 6292/VBM_6292+tlrc 6292/Proc_FIRST_3RUNS_6292_April2019.results/6292_RevP_acq_incor+tlrc \
6292 pat rev corr 6292/VBM_6292+tlrc 6292/Proc_FIRST_3RUNS_6292_April2019.results/6292_RevP_rev_corr+tlrc \
6292 pat rev incor 6292/VBM_6292+tlrc 6292/Proc_FIRST_3RUNS_6292_April2019.results/6292_RevP_rev_incor+tlrc \
8225 pat acq corr 8225/VBM_8225+tlrc 8225/Proc_FIRST_8225_April2019.results/8225_RevP_acq_corr+tlrc \
8225 pat acq incor 8225/VBM_8225+tlrc 8225/Proc_FIRST_8225_April2019.results/8225_RevP_acq_incor+tlrc \
8225 pat rev corr 8225/VBM_8225+tlrc 8225/Proc_FIRST_8225_April2019.results/8225_RevP_rev_corr+tlrc \
