AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 09, 2020 11:29AM
> you would test masking out voxels that have any of those large betas? (I.e. great than [+/-2]?

There are more principled ways to handle outliers, but censoring them is more economical and straightforward.

> Wouldn't adding back in censored stimuli potentially add spurious correlations due to widespread sensitivity
> of correlations across voxels to motion? Is the point just to see whether that gets rid of the large betas, but not
> necessarily to analyze the final data in this way?

I'm not aware of any systematic exploration about this. Censoring due to head motion adjustment, as I mentioned, is likely just one of the possible sources of rendering outlying betas. It would be quite an undertaking to explore this small project. If you can afford it, you can just remove those beta outliers when computing correlations among regions.

Also, Paul raises a potential concern and suggests that scaling should be always performed because of brightness inhomogeneity across voxels within an ROI.

Gang



Edited 1 time(s). Last edit at 09/09/2020 11:38AM by Gang.
Subject Author Posted

3dNetCorr on Event-Related Task fmri

jyaros August 31, 2020 05:24PM

Re: 3dNetCorr on Event-Related Task fmri

ptaylor August 31, 2020 05:42PM

Re: 3dNetCorr on Event-Related Task fmri

Cesar Caballero Gaudes August 31, 2020 06:09PM

Re: 3dNetCorr on Event-Related Task fmri

jyaros August 31, 2020 07:56PM

Re: 3dNetCorr on Event-Related Task fmri

Cesar Caballero Gaudes September 01, 2020 05:43AM

Re: 3dNetCorr on Event-Related Task fmri

jyaros September 01, 2020 09:42AM

Re: 3dNetCorr on Event-Related Task fmri

gang September 01, 2020 02:33PM

Re: 3dNetCorr on Event-Related Task fmri

jyaros September 07, 2020 01:49AM

Re: 3dNetCorr on Event-Related Task fmri

gang September 08, 2020 09:00AM

Re: 3dNetCorr on Event-Related Task fmri

jyaros September 08, 2020 05:35PM

Re: 3dNetCorr on Event-Related Task fmri

gang September 09, 2020 11:29AM

Re: 3dNetCorr on Event-Related Task fmri

jyaros September 11, 2020 12:22AM

Re: 3dNetCorr on Event-Related Task fmri

gang September 12, 2020 12:42PM

Re: 3dNetCorr on Event-Related Task fmri

jyaros September 13, 2020 09:51PM

Re: 3dNetCorr on Event-Related Task fmri

gang September 14, 2020 02:04PM