AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
eji
December 18, 2020 12:15PM
ok we have updated our AFNI version grinning smiley

Attached is the screenshot from @djunct_overlap_check with the T1 and T2 data. Does it seem problematic?

Is there a solution to the issue of the aligned T1 (output of fat_proc_align_anat_pair) being cut off? I hope!
Additionally, the command itself (fat_proc_align_anat_pair) takes several hours per subject, even on a 32 core machine!
Attachments:
open | download - T1_T2_overlay.jpg (220.1 KB)
Subject Author Posted

Creating mask: 3dSkullstrip + 3dAutomask ok? Attachments

eji December 15, 2020 10:20AM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok?

ptaylor December 15, 2020 12:40PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok?

eji December 15, 2020 12:57PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok?

ptaylor December 15, 2020 01:26PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok? Attachments

eji December 16, 2020 01:14PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok?

ptaylor December 16, 2020 02:07PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok?

eji December 16, 2020 02:55PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok?

ptaylor December 16, 2020 04:01PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok? Attachments

eji December 18, 2020 12:15PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok?

eji January 06, 2021 02:12PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok?

ptaylor January 08, 2021 10:06AM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok? Attachments

ptaylor January 08, 2021 01:34PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok? Attachments

eji January 09, 2021 07:17AM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok? Attachments

ptaylor January 11, 2021 11:54AM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok? Attachments

eji January 25, 2021 03:54PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok?

ptaylor January 25, 2021 08:59PM

Re: Creating mask: 3dSkullstrip + 3dAutomask ok?

eji January 26, 2021 01:06AM