AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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December 16, 2020 11:34AM
Dear Dr. Gang Chen,

I guess I am running into a trivial bug related to the calculation of MME in your paper: Chen, G., Taylor, P.A., Haller, S.P., Kircanski, K., Stoddard, J., Pine, D.S., Leibenluft, E., Brotman, M.A., Cox, R.W., 2018. Intraclass correlation: Improved modeling approaches and applications for neuroimaging. Human brain mapping 39, 1187–1206.

The small bug is in the 757th line of 3dICC.R (in NIH Biowulf's most current version of AFNI) and it is the wrong var name of "Mask", which should be "lop$maskData" per my guess. Can you verify? Thanks.

Best,
Xiaowei
Subject Author Posted

A possible small error/bug related to 3dICC's calculation of MME

Xiaowei Song December 16, 2020 11:34AM

Re: A possible small error/bug related to 3dICC's calculation of MME

gang December 17, 2020 08:31AM

Re: A possible small error/bug related to 3dICC's calculation of MME

Xiaowei Song December 17, 2020 10:57AM

Re: A possible small error/bug related to 3dICC's calculation of MME

gang December 18, 2020 08:17AM

Re: A possible small error/bug related to 3dICC's calculation of MME

Xiaowei Song December 18, 2020 10:36AM

Re: A possible small error/bug related to 3dICC's calculation of MME

gang December 20, 2020 07:48PM

Re: A possible small error/bug related to 3dICC's calculation of MME

Xiaowei Song December 21, 2020 09:50PM

Re: A possible small error/bug related to 3dICC's calculation of MME

gang December 23, 2020 12:40PM

Re: A possible small error/bug related to 3dICC's calculation of MME

Xiaowei Song December 29, 2020 03:43PM