AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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rick reynolds
March 13, 2021 02:13PM
Hi Jenna,

That suggests that there is not much censoring going on.
What are your censoring thresholds (possibly for both outliers and motion)?
What sorts of numbers are you seeing across subjects for "TRs censored" or for "censor fraction"?

Note that you can use gen_ss_review_table.py to generate a spreadsheet of those numbers across all subjects. It can also be used to show subjects to drop for exceeding any limits on those values. See "gen_ss_review_table.py -help" for examples 1 and 3, say.

- rick
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Motion displacement from out.ss_review.$sub

jkblujus March 12, 2021 03:46PM

Re: Motion displacement from out.ss_review.$sub

rick reynolds March 13, 2021 02:13PM