August 08, 2021 09:51AM | |
Moderator Registered: 12 years ago Posts: 2,212 |
3dClusterize -clust_nvox 200 -bisided -8.0 8.0 -ithr 2 -idat 1 -NN 1 -inset func_slim+orig. -quiet > visual_clusters.1D whereami -coord_file visual_clusters.1D'[1,2,3]' -tab cat visual_clusters.1D 3308 1.4 71.2 4.6 -63.2 63.3 -10.0 94.5 -17.7 33.3 1.6939 0.0218 10.378 30.3 83.5 15.3 707 -3.5 72.3 20.0 -24.7 22.1 56.0 86.2 -11.7 54.3 -0.8994 0.0164 -3.2158 -2.7 64.2 36.3 335 -60.8 11.0 12.7 -74.2 -43.9 -12.8 34.0 3.3 24.3 1.0238 0.0302 3.5243 -71.4 17.5 12.3 whereami -coord_file visual_clusters.1D'[1,2,3]' -tab ++ Input coordinates orientation set by default rules to RAI +++++++ nearby Atlas structures +++++++ Original input data coordinates in TLRC space Focus point (LPI) Coord.Space -1.40 mm [L], -71.20 mm [P], 4.60 mm [S] {TLRC} -1.41 mm [L], -73.55 mm [P], 1.12 mm [S] {MNI} -1.41 mm [L], -77.55 mm [P], 6.12 mm [S] {MNI_ANAT} Atlas Within Label Prob. Code MNI_Glasser_HCP_v1.0 0.0 L_Primary_Visual_Cortex MPM 1 MNI_Glasser_HCP_v1.0 2.0 L_Second_Visual_Area MPM 4 MNI_Glasser_HCP_v1.0 2.0 R_Primary_Visual_Cortex MPM 1001 MNI_Glasser_HCP_v1.0 4.0 R_Second_Visual_Area MPM 1004 Brainnetome_1.0 0.0 rCunG_left MPM 191 Brainnetome_1.0 2.0 rCunG_right MPM 192 Brainnetome_1.0 5.0 rLinG_left MPM 195 Brainnetome_1.0 7.0 vmPOS_left MPM 197 Brainnetome_1.0 7.0 cLinG_right MPM 190 CA_ML_18_MNI 0.0 Left Lingual Gyrus --- 47 CA_ML_18_MNI 3.0 Right Lingual Gyrus --- 48 CA_ML_18_MNI 5.0 Left Calcarine Gyrus --- 43 CA_ML_18_MNI 6.0 Cerebellar Vermis (6) --- 112 CA_ML_18_MNI 6.0 Right Calcarine Gyrus --- 44 ...
whereami -coord_file visual_clusters.1D'[1,2,3]' -tab -atlas MNI_Glasser_HCP_v1.0 -max_search_radius 1
Original input data coordinates in TLRC space Focus point (LPI) Coord.Space 60.80 mm [R], -11.00 mm [P], 12.70 mm [S] {TLRC} 61.41 mm [R], -11.98 mm [P], 13.19 mm [S] {MNI} 61.41 mm , -15.98 mm [P], 18.19 mm [S] {MNI_ANAT} Atlas Within Label Prob. Code MNI_Glasser_HCP_v1.0 0.0 R_Area_OP4/PV MPM 1100
whereami -atlas MNI_Glasser_HCP_v1.0 -show_atlas_code
Subject | Author | Posted |
---|---|---|
Voxel time series with ROI labels |
Muhammad Shahzaib | August 05, 2021 05:58AM |
Re: Voxel time series with ROI labels |
Daniel Glen | August 08, 2021 09:51AM |