AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
October 20, 2021 02:44AM
Dear Rick,

I started AFNI_proc again last evening to let it run overnight. Now, around 14 hours later, it is still processing subject1 (as you can see on the screenshot below). This screenshot also shows you where AFNI seems to be stuck.

Additional information:
- AFNI_proc took around 1 hour for the resting-state run per subject. Number of time steps (resting-state): 360.
- Now lets compare this to the task-based runs: Number of time steps: 1180. Again, there are also 6 runs here instead of 1.

Does the processing time scale in a linear fashion? Even if that would be the case, that is, around 3 hours per run (from 360 to 1180) times 6 makes 18 hours per subject. Or would you assume that something is going wrong here?

Philipp
Attachments:
open | download - 12.png (311.8 KB)
Subject Author Posted

AFNI_proc Preprocessing does not finish

Philipp October 17, 2021 06:27AM

Re: AFNI_proc Preprocessing does not finish

rick reynolds October 18, 2021 10:28AM

Re: AFNI_proc Preprocessing does not finish

Philipp October 18, 2021 11:30AM

Re: AFNI_proc Preprocessing does not finish

rick reynolds October 18, 2021 01:13PM

Re: AFNI_proc Preprocessing does not finish Attachments

Philipp October 20, 2021 02:44AM

Re: AFNI_proc Preprocessing does not finish

Philipp October 20, 2021 03:59AM