AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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rick reynolds
November 04, 2021 09:24PM
Hi Philipp,

The flat_namespace bit is secondary, and might just be because apple tries to make working with such variable more and more difficult. <sigh>
In any case, just add that same .bashrc line to your ~/.zshrc file (if it isn't already there). 

export DYLD_LIBRARY_PATH=${DYLD_LIBRARY_PATH}:/opt/X11/lib/flat_namespace

But R_io.so is compiled against R version 3.6.x. So on a mac at least, it does not currently work with 4.x.
If you really want to use the R packages on that mac, it might be necessary to compile AFNI locally, which might take some work (the homebrew dependencies seem to be a bit of a moving target right now). Is that something that you would like to consider? Otherwise, is installing 3.6 an option?

- rick
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Subject Author Posted

Re: Failed to load R_io.so

Philipp November 01, 2021 03:57AM

Re: Failed to load R_io.so

rick reynolds November 04, 2021 09:24PM

Re: Failed to load R_io.so

Philipp November 05, 2021 06:27AM

Re: Failed to load R_io.so

gang November 05, 2021 11:21AM